{
  "_id": "6a1ef39ab401979e73415517",
  "Package": "popPCR",
  "Title": "Classify Digital PCR Droplets by Fitting Fluorescence\nPopulations",
  "Version": "0.1.1.1",
  "Authors@R": "person(given = \"Joyce Emlyn\",\nfamily = \"Guiao\",\nrole = c(\"aut\", \"cre\"),\nemail = \"joyce_emlyn_guiao@dlsu.edu.ph\")",
  "Description": "Estimates DNA target concentration by classifying digital\nPCR (polymerase chain reaction) droplets as positive, negative,\nor rain, using Expectation-Maximization Clustering. The fitting\nis accomplished using the 'EMMIXskew' R package (v. 1.0.3) by\nKui Wang, Angus Ng, and Geoff McLachlan (2018) as based on\ntheir paper \"Multivariate Skew t Mixture Models: Applications\nto Fluorescence-Activated Cell Sorting Data\"\n<doi:10.1109/DICTA.2009.88>.",
  "License": "GPL (>= 3)",
  "LazyLoad": "yes",
  "Encoding": "UTF-8",
  "LazyData": "true",
  "NeedsCompilation": "yes",
  "Roxygen": "list(markdown = TRUE)",
  "RoxygenNote": "7.1.1",
  "Repository": "https://zeroh729.r-universe.dev",
  "Date/Publication": "2021-03-09 14:52:05 UTC",
  "RemoteUrl": "https://github.com/zeroh729/poppcr",
  "RemoteRef": "HEAD",
  "RemoteSha": "e0f0f4c22b2f14f4168c89de466bcd7d2240a41e",
  "Packaged": {
    "Date": "2026-05-19 07:23:47 UTC",
    "User": "root"
  },
  "Author": "Joyce Emlyn Guiao [aut, cre]",
  "Maintainer": "Joyce Emlyn Guiao <joyce_emlyn_guiao@dlsu.edu.ph>",
  "MD5sum": "58c587967e564eea149f749d31302c65",
  "_user": "zeroh729",
  "_type": "src",
  "_file": "popPCR_0.1.1.1.tar.gz",
  "_fileid": "bce0015abda1c6898c0d70b6c1fd01554fa33833a50a4fc3506a863c08bbc86b",
  "_filesize": 237299,
  "_sha256": "bce0015abda1c6898c0d70b6c1fd01554fa33833a50a4fc3506a863c08bbc86b",
  "_created": "2026-05-19T07:23:47.000Z",
  "_published": "2026-06-02T15:15:38.802Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 79105291858,
      "time": 106,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7077304108"
    },
    {
      "job": 79105290005,
      "time": 110,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7077305302"
    },
    {
      "job": 79105291776,
      "time": 98,
      "config": "linux-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7077301700"
    },
    {
      "job": 79105291057,
      "time": 102,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7077303062"
    },
    {
      "job": 79105290811,
      "time": 157,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7077312039"
    },
    {
      "job": 79105290119,
      "time": 370,
      "config": "macos-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7077381824"
    },
    {
      "job": 79105291367,
      "time": 160,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7077311603"
    },
    {
      "job": 79105290328,
      "time": 261,
      "config": "macos-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7077342470"
    },
    {
      "job": 79105288553,
      "time": 133,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7077269917"
    },
    {
      "job": 79105288677,
      "time": 105,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7361901026"
    },
    {
      "job": 79105290240,
      "time": 93,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7077299582"
    },
    {
      "job": 79105291521,
      "time": 89,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7077298443"
    },
    {
      "job": 79105290368,
      "time": 91,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7077299506"
    }
  ],
  "_buildurl": "https://github.com/r-universe/zeroh729/actions/runs/26082542236",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/zeroh729/poppcr",
  "_commit": {
    "id": "e0f0f4c22b2f14f4168c89de466bcd7d2240a41e",
    "author": "zeroh729 <zeroh729@gmail.com>",
    "committer": "zeroh729 <zeroh729@gmail.com>",
    "message": "Attempt to fix LTO notes in FORTRAN codes\nSubmitted as v.0.1.1.1 in CRAN\n",
    "time": 1615301525
  },
  "_maintainer": {
    "name": "Joyce Emlyn Guiao",
    "email": "joyce_emlyn_guiao@dlsu.edu.ph",
    "login": "zeroh729",
    "description": "",
    "uuid": 6309560
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "graphics",
      "role": "Depends"
    },
    {
      "package": "stats",
      "role": "Depends"
    },
    {
      "package": "methods",
      "role": "Depends"
    },
    {
      "package": "grDevices",
      "role": "Depends"
    },
    {
      "package": "R",
      "version": ">= 2.10",
      "role": "Depends"
    },
    {
      "package": "mvtnorm",
      "role": "Imports"
    }
  ],
  "_owner": "zeroh729",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 0,
  "_contributors": [
    {
      "user": "zeroh729",
      "count": 11,
      "uuid": 6309560
    }
  ],
  "_userbio": {
    "uuid": 6309560,
    "type": "user",
    "name": "Zeroh729"
  },
  "_downloads": {
    "count": 210,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/popPCR"
  },
  "_devurl": "https://github.com/zeroh729/poppcr",
  "_searchresults": 4,
  "_topics": [
    "openblas"
  ],
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/popPCR.html",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/zeroh729/poppcr",
  "_realowner": "zeroh729",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.1.0",
      "date": "2021-03-03"
    },
    {
      "version": "0.1.1.1",
      "date": "2021-03-10"
    }
  ],
  "_exports": [
    "calculateConc",
    "popPCR",
    "printSummaryConc",
    "printSummaryFit"
  ],
  "_datasets": [
    {
      "name": "x_multiPop",
      "title": "dPCR sample w/ >=3 populations",
      "object": "x_multiPop",
      "class": [
        "numeric"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    },
    {
      "name": "x_onePop",
      "title": "dPCR sample w/ 1 population",
      "object": "x_onePop",
      "class": [
        "numeric"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    },
    {
      "name": "x_twoPop",
      "title": "dPCR sample w/ 2 populations",
      "object": "x_twoPop",
      "class": [
        "numeric"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "calculateConc",
      "title": "Target copies estimation",
      "topics": [
        "calculateConc"
      ]
    },
    {
      "page": "popPCR",
      "title": "EM Mixture Model fitting of dPCR droplet fluorescence",
      "topics": [
        "popPCR"
      ]
    },
    {
      "page": "printSummaryConc",
      "title": "Print result summary of popPCR",
      "topics": [
        "printSummaryConc"
      ]
    },
    {
      "page": "printSummaryFit",
      "title": "Print fitted mixture model estimates from popPCR",
      "topics": [
        "printSummaryFit"
      ]
    },
    {
      "page": "x_multiPop",
      "title": "dPCR sample w/ >=3 populations",
      "topics": [
        "x_multiPop"
      ]
    },
    {
      "page": "x_onePop",
      "title": "dPCR sample w/ 1 population",
      "topics": [
        "x_onePop"
      ]
    },
    {
      "page": "x_twoPop",
      "title": "dPCR sample w/ 2 populations",
      "topics": [
        "x_twoPop"
      ]
    }
  ],
  "_readme": "https://github.com/zeroh729/poppcr/raw/HEAD/README.md",
  "_rundeps": [
    "mvtnorm"
  ],
  "_sysdeps": [
    {
      "shlib": "liblapack",
      "package": "libopenblas0-pthread",
      "source": "openblas",
      "version": "0.3.26+ds-1ubuntu0.1",
      "name": "openblas",
      "homepage": "https://www.openblas.net/",
      "description": "Optimized BLAS (linear algebra) library (shared lib, pthread)"
    },
    {
      "shlib": "libblas",
      "package": "libopenblas0-pthread",
      "source": "openblas",
      "version": "0.3.26+ds-1ubuntu0.1",
      "name": "openblas",
      "homepage": "https://www.openblas.net/",
      "description": "Optimized BLAS (linear algebra) library (shared lib, pthread)"
    }
  ],
  "_score": 2.6989700043360187,
  "_indexed": true,
  "_nocasepkg": "poppcr",
  "_universes": [
    "zeroh729"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.1.1",
      "date": "2026-05-19T07:25:38.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "e0f0f4c22b2f14f4168c89de466bcd7d2240a41e",
      "fileid": "49a99205c04d343007e20bd730c1e794afeabeac2ff9e12d4d9019e88fcfbf49",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zeroh729/actions/runs/26082542236"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.1.1",
      "date": "2026-05-19T07:25:38.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "e0f0f4c22b2f14f4168c89de466bcd7d2240a41e",
      "fileid": "6a03fcdc83bafd5a10b81a04075df1fa0bb4651e5cde9ba8b1e40af9830d5180",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zeroh729/actions/runs/26082542236"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.1.1.1",
      "date": "2026-05-19T07:25:32.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "e0f0f4c22b2f14f4168c89de466bcd7d2240a41e",
      "fileid": "29b6a953bb69f0a5dbd2d0efa9f4bf80f70b02bee757307d3056304b65b1d5e6",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zeroh729/actions/runs/26082542236"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.1.1.1",
      "date": "2026-05-19T07:25:31.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "e0f0f4c22b2f14f4168c89de466bcd7d2240a41e",
      "fileid": "818b6cb80c7befa6d03ff0f04c9877a6a0a390963d6b87b3cb023da7e827e97f",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zeroh729/actions/runs/26082542236"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.1.1",
      "date": "2026-05-19T07:26:02.000Z",
      "arch": "aarch64",
      "commit": "e0f0f4c22b2f14f4168c89de466bcd7d2240a41e",
      "fileid": "f69f24666bbd7f4a8f90e37d75a16c3fbe83e4f846cc6f568cb74fbfb12f429a",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zeroh729/actions/runs/26082542236"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.1.1",
      "date": "2026-05-19T07:29:21.000Z",
      "arch": "x86_64",
      "commit": "e0f0f4c22b2f14f4168c89de466bcd7d2240a41e",
      "fileid": "74d851a47ea954a4d7d3a755ad78f9e58bdf35633ff0441fb13fc69dbe54a127",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zeroh729/actions/runs/26082542236"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.1.1.1",
      "date": "2026-05-19T07:25:52.000Z",
      "arch": "aarch64",
      "commit": "e0f0f4c22b2f14f4168c89de466bcd7d2240a41e",
      "fileid": "539d813719866ca76aa92c038341c96910bf47cc57626d511e0abfde84e93a1a",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zeroh729/actions/runs/26082542236"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.1.1.1",
      "date": "2026-05-19T07:27:07.000Z",
      "arch": "x86_64",
      "commit": "e0f0f4c22b2f14f4168c89de466bcd7d2240a41e",
      "fileid": "8e6beba2a7e0797ebb183cd4a08762f3d800232d7ffacf8e4f435cf61c14174f",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zeroh729/actions/runs/26082542236"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.1.1.1",
      "date": "2026-05-19T07:24:53.000Z",
      "arch": "x86_64",
      "commit": "e0f0f4c22b2f14f4168c89de466bcd7d2240a41e",
      "fileid": "8fc9692ecb78d167cc72c3daf52e14ff172ca7e1b39a4d2ffe7a2cf8a643887b",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zeroh729/actions/runs/26082542236"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.1.1.1",
      "date": "2026-05-19T07:25:02.000Z",
      "arch": "x86_64",
      "commit": "e0f0f4c22b2f14f4168c89de466bcd7d2240a41e",
      "fileid": "9dd389423c63b61f220f0256d3b39a4776f85ac2fb0018ed04acce6b3f0447b8",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zeroh729/actions/runs/26082542236"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.1.1.1",
      "date": "2026-05-19T07:24:54.000Z",
      "arch": "x86_64",
      "commit": "e0f0f4c22b2f14f4168c89de466bcd7d2240a41e",
      "fileid": "b05d44d8d273e6bee0481559795de42649857fe8de21ed0ce3708f53cf7a1beb",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zeroh729/actions/runs/26082542236"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.1.1.1",
      "date": "2026-06-02T15:15:09.000Z",
      "arch": "emscripten",
      "commit": "e0f0f4c22b2f14f4168c89de466bcd7d2240a41e",
      "fileid": "fa1b60fdc35ea340275faac54cd3cfe1194429a9bd25ff42028e257564b6d860",
      "status": "success",
      "buildurl": "https://github.com/r-universe/zeroh729/actions/runs/26082542236"
    }
  ]
}